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Set a flag for 2019
2019年的目标: 语言考试,申请学校 3篇文章发表(SE400, moth, fungi) 系统学习进化方面的理论,以著名的学者以及他们的理论作为线索,整理出系列文章 自己开发一个扩增子聚类软件和一个简单的组装软件 入门机器学习和熟练掌握Pyth... -
compare three methods to parse fasta using python
当我们在写一个比较复杂的脚本时,往往会涉及到很多小的函数,但是实现其功能的写法有很多种,如果能够清楚他们的速度,那么又便于提升我们代码整体的效率。
举一个非常简单而又常用的例子,用python写一个转化fasta文件的反向互补序列的脚本。
实现的方法有很多种,我们这里只讨论3中比较常用的:
- replace()
- dictionary
- transtable()
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A guide to volleyball beginner
个人整理了一些排球的入门资料,仅供有兴趣的小伙伴学习和分享。
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A bug of import reference from google scholar using endnote fromat
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Mitochondrioal genome assembly appraches
Mitochondrioal genome assembly apprachesSOAPdenovo-Translinkhttps://github.com/aquaskyline/SOAPdenovo-Trans example1234SOAP... -
Single-cell-sequencing
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Get Wikipedia page using python
background
I got a long list of animals, about 9000, and I need to figure out where each animal lives, specially whether lives in Africa. Unfortunately, there is no one database containing this kind information, all website I can got from internet is something like common knowledge other than a scientific list. Finally, I realized I forget a powful tool - wikipedia, but how to make it? I can not search them one by one, it must kill me. wait, I can code to solve this problem, come on, I am a bioinformatican.
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[BUG]-diamond of parsering xml result
ERROR
Parse error for this part of the blast XML document: Error on line 1042356: The entity name must immediately follow the ‘&’ in the entity reference.
When I use diamond replacing blast to search NR database, the result with xml format can’t be parsed by blast2GO. Aftering see this page, I got it soloved.
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Can not find libMagickCore-6.Q16.so.2
display error
Display command in linux might be used often if you are using a linux/unix remote terminal on a windows or MacOS system.
If you want to displat an image on remote host into local host, you must install xQuartz to MacOS or Xming to windows, and with ImageMagick installed in remote linux system.
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An error when install perl module: GD